Cba_g68354

Description : component *(eL29) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0000571 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000571_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g68354
Cluster	HCCA: Cluster_220

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00203750	evm_27.TU.AmTr_v1...	Probable protein phosphatase 2C BIPP2C1 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
AT2G30170	No alias	Protein phosphatase 2C family protein	0.03	OrthoFinder output from all 47 species
AT4G33500	No alias	Protein phosphatase 2C family protein	0.03	OrthoFinder output from all 47 species
Ala_g06302	No alias	phosphatase *(PBCP) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g32280	No alias	phosphatase *(PBCP) & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.1Z173900.1	Ceric.1Z173900	phosphatase *(PBCP) & original description:...	0.07	OrthoFinder output from all 47 species
Dac_g09847	No alias	phosphatase *(PBCP) & original description: none	0.06	OrthoFinder output from all 47 species
Dcu_g33331	No alias	phosphatase *(PBCP) & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g26968	No alias	phosphatase *(PBCP) & original description: none	0.08	OrthoFinder output from all 47 species
Ehy_g02459	No alias	phosphatase *(PBCP) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g17993	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
GSVIVT01024641001	No alias	Photosynthesis.photophosphorylation.photosystem...	0.04	OrthoFinder output from all 47 species
LOC_Os01g07090.1	LOC_Os01g07090	photosynthetic acclimation PBCP phosphatase	0.08	OrthoFinder output from all 47 species
LOC_Os03g09220.1	LOC_Os03g09220	Probable protein phosphatase 2C BIPP2C1 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
Len_g20278	No alias	phosphatase *(PBCP) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g17211	No alias	phosphatase *(PBCP) & original description: none	0.03	OrthoFinder output from all 47 species
Mp8g04000.1	No alias	Probable protein phosphatase 2C 71 OS=Oryza sativa...	0.04	OrthoFinder output from all 47 species
Msp_g05138	No alias	phosphatase *(PBCP) & original description: none	0.08	OrthoFinder output from all 47 species
Nbi_g05276	No alias	phosphatase *(PBCP) & original description: none	0.07	OrthoFinder output from all 47 species
Pir_g04619	No alias	phosphatase *(PBCP) & original description: none	0.07	OrthoFinder output from all 47 species
Ppi_g12898	No alias	phosphatase *(PBCP) & original description: none	0.04	OrthoFinder output from all 47 species
Solyc01g105020.3.1	Solyc01g105020	Probable protein phosphatase 2C 71 OS=Oryza sativa...	0.05	OrthoFinder output from all 47 species
Solyc06g007350.4.1	Solyc06g007350	photosynthetic acclimation PBCP phosphatase	0.07	OrthoFinder output from all 47 species
Zm00001e016822_P004	Zm00001e016822	photosynthetic acclimation PBCP phosphatase	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004045	aminoacyl-tRNA hydrolase activity	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0031072	heat shock protein binding	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001932	PPM-type_phosphatase-like_dom	258	440
IPR002673	Ribosomal_L29e	3	42

External Links

No external refs found!

Cba_g68354

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation