Description : component *(RPP2) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0000215 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000215_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cba_g69352 | |
| Cluster | HCCA: Cluster_206 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G44590 | No alias | 60S acidic ribosomal protein family | 0.02 | OrthoFinder output from all 47 species | |
| Als_g24871 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g21272 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g55362 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g66137 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Cre02.g143050 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g43526 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g42097 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g18589 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g06260.1 | No alias | component RPP2 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g19056 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c1_27060V3.1 | Pp3c1_27060 | 60S acidic ribosomal protein family | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g33808 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g41562 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g17151 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g22627 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g38961 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g40093 | No alias | component *(RPP2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g067100.2.1 | Solyc11g067100 | component RPP2 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e026591_P001 | Zm00001e026591 | component RPP2 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e026592_P001 | Zm00001e026592 | component RPP2 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e026593_P001 | Zm00001e026593 | component RPP2 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e041900_P001 | Zm00001e041900 | component RPP2 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
