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  5. Cba_g70261

Cba_g70261


Description : autophagosome ATG8-maturation peptidase *(ATG4) & original description: none


Gene families : OG0002462 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002462_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g70261

Target Alias Description ECC score Gene Family Method Actions
Adi_g046967 No alias autophagosome ATG8-maturation peptidase *(ATG4) &... 0.02 OrthoFinder output from all 47 species
Azfi_s0068.g036373 No alias autophagosome ATG8-maturation peptidase *(ATG4) &... 0.03 OrthoFinder output from all 47 species
Ehy_g21265 No alias autophagosome ATG8-maturation peptidase *(ATG4) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01003913001 No alias Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.03 OrthoFinder output from all 47 species
Len_g13669 No alias autophagosome ATG8-maturation peptidase *(ATG4) &... 0.04 OrthoFinder output from all 47 species
Lfl_g35302 No alias autophagosome ATG8-maturation peptidase *(ATG4) &... 0.02 OrthoFinder output from all 47 species
Lfl_g35668 No alias autophagosome ATG8-maturation peptidase *(ATG4) &... 0.03 OrthoFinder output from all 47 species
MA_101221g0010 No alias ATG4 autophagosome ATG8-maturation peptidase 0.01 OrthoFinder output from all 47 species
Sam_g30173 No alias autophagosome ATG8-maturation peptidase *(ATG4) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0019786 Atg8-specific peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
CC GO:0044599 AP-5 adaptor complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR046792 Peptidase_C54_cat 132 369
No external refs found!