Lfl_g37802


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g37802

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00110050 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00041p00129840 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g32430,... 0.03 OrthoFinder output from all 47 species
AT2G40720 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G21065 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g005637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058786 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g068879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g089164 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g101211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16835 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17255 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05685 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18048 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g23735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26685 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g33642 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05931 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g27000 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g27916 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g39832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22510 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene13980.t1 Aspi01Gene13980 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27915.t1 Aspi01Gene27915 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57232.t1 Aspi01Gene57232 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000396 No alias not classified & original description: CDS=1-2745 0.03 OrthoFinder output from all 47 species
Azfi_s0045.g030112 No alias not classified & original description: CDS=94-318 0.04 OrthoFinder output from all 47 species
Cba_g11358 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20724 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G038700.1 Ceric.23G038700 not classified & original description: pacid=50609782... 0.05 OrthoFinder output from all 47 species
Ceric.25G047500.1 Ceric.25G047500 not classified & original description: pacid=50594463... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g12450 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g12748 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g14692 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40815 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16929 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21664 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g24322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26440 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07052 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13325 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19361 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20660 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012461001 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
GSVIVT01029254001 OSB4 RNA biosynthesis.organelle machineries.RNA polymerase... 0.04 OrthoFinder output from all 47 species
Len_g03881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g40700 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10338179g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Msp_g34215 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g17545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18050 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20337 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g22565 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g17858 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g21989 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g22409 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28656 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40943 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43620 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12984 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15819 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g04238 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07521 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g36018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39360 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g40990 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g43237 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g53019 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53979 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54615 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55202 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013095 No alias not classified & original description: CDS=481-975 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0060.g015229 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-1704 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019295 No alias not classified & original description: CDS=1-1539 0.02 OrthoFinder output from all 47 species
Sam_g06265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28894 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g34625 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50801 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo72131 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
Smo92008 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
Spa_g07598 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10134 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06105 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27708 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35681 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g43830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001918_P001 EMB2758, Zm00001e001918 Pentatricopeptide repeat-containing protein At4g33990... 0.03 OrthoFinder output from all 47 species
Zm00001e023800_P003 PDE247, CLB19,... RNA editing factor (CLB19) 0.03 OrthoFinder output from all 47 species
Zm00001e032242_P001 Zm00001e032242 Pentatricopeptide repeat-containing protein At1g18485... 0.02 OrthoFinder output from all 47 species
Zm00001e032485_P001 EMB2744, Zm00001e032485 Pentatricopeptide repeat-containing protein At5g39680... 0.03 OrthoFinder output from all 47 species
Zm00001e035817_P001 Zm00001e035817 Pentatricopeptide repeat-containing protein At4g32430,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 142 162
IPR002885 Pentatricopeptide_repeat 270 318
IPR002885 Pentatricopeptide_repeat 65 111
IPR002885 Pentatricopeptide_repeat 168 214
No external refs found!