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  5. Lfl_g37809

Lfl_g37809 (YCF5)


Aliases : YCF5

Description : assembly factor CcsA of CCS cytochrome f/c6 maturation system (system II) & original description: none


Gene families : OG0008998 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008998_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g37809
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
ATCG01040 YCF5 Cytochrome C assembly protein 0.13 OrthoFinder output from all 47 species
Aev_g47212 YCF5 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.23 OrthoFinder output from all 47 species
Aob_g08809 YCF5 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Cba_g78789 YCF5 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.17 OrthoFinder output from all 47 species
Ceric.01G044100.1 YCF5, Ceric.01G044100 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.09 OrthoFinder output from all 47 species
Ceric.05G043800.1 YCF5, Ceric.05G043800 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.08 OrthoFinder output from all 47 species
Ceric.18G053700.1 YCF5, Ceric.18G053700 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.1 OrthoFinder output from all 47 species
Ceric.19G029400.1 YCF5, Ceric.19G029400 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Ceric.35G068700.1 YCF5, Ceric.35G068700 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Ceric.39G055700.1 YCF5, Ceric.39G055700 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
GSVIVT01004975001 YCF5 Photosynthesis.photophosphorylation.cytochrome b6/f... 0.07 OrthoFinder output from all 47 species
Gb_33050 YCF5 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.12 OrthoFinder output from all 47 species
LOC_Os06g46434.1 YCF5, LOC_Os06g46434 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.17 OrthoFinder output from all 47 species
Nbi_g17271 YCF5 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.09 OrthoFinder output from all 47 species
Solyc00g500194.1.1 YCF5, Solyc00g500194 Cytochrome c biogenesis protein CcsA OS=Solanum... 0.12 OrthoFinder output from all 47 species
Solyc08g022180.1.1 YCF5, Solyc08g022180 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.13 OrthoFinder output from all 47 species
Solyc11g021210.2.1 YCF5, Solyc11g021210 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0017004 cytochrome complex assembly IEA Interproscan
MF GO:0020037 heme binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002541 Cyt_c_assembly 66 315
No external refs found!