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  5. Cba_g71906

Cba_g71906


Description : AHL clade-B transcription factor & original description: none


Gene families : OG0000325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000325_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g71906

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00189120 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 20... 0.03 OrthoFinder output from all 47 species
AMTR_s00041p00022450 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 24... 0.02 OrthoFinder output from all 47 species
AT2G35270 GIK Predicted AT-hook DNA-binding family protein 0.02 OrthoFinder output from all 47 species
AT4G12050 No alias Predicted AT-hook DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT4G17800 No alias Predicted AT-hook DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT4G22810 No alias Predicted AT-hook DNA-binding family protein 0.04 OrthoFinder output from all 47 species
AT5G49700 No alias Predicted AT-hook DNA-binding family protein 0.03 OrthoFinder output from all 47 species
Adi_g113042 AHL22 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22543 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04207 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19869 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g29083 AHL22 AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene36324.t1 Aspi01Gene36324 AHL clade-A transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0006.g010423 No alias AHL clade-A transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.03G090400.1 AHL20, Ceric.03G090400 AHL clade-B transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g13007 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06406 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016497001 AHL15, AGF2 AT-hook motif nuclear-localized protein 15... 0.02 OrthoFinder output from all 47 species
LOC_Os02g48320.3 AHL27, ORE7,... AT-hook motif nuclear-localized protein 25... 0.03 OrthoFinder output from all 47 species
LOC_Os03g16350.1 AHL22, LOC_Os03g16350 AT-hook motif nuclear-localized protein 22... 0.02 OrthoFinder output from all 47 species
LOC_Os04g50030.1 LOC_Os04g50030 AT-hook motif nuclear-localized protein 23... 0.03 OrthoFinder output from all 47 species
LOC_Os07g13100.1 AHL20, LOC_Os07g13100 AT-hook motif nuclear-localized protein 20... 0.02 OrthoFinder output from all 47 species
LOC_Os08g06320.1 LOC_Os08g06320 AT-hook motif nuclear-localized protein 23... 0.02 OrthoFinder output from all 47 species
MA_19068g0010 AHL20 AT-hook motif nuclear-localized protein 20... 0.02 OrthoFinder output from all 47 species
MA_41289g0010 GIK AT-hook motif nuclear-localized protein 17... 0.02 OrthoFinder output from all 47 species
Pir_g37811 AHL15, AGF2 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17799 No alias AHL clade-A transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g20885 AHL22 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05146 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12074 AHL22 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g082810.4.1 AHL27, ORE7,... AT-hook motif nuclear-localized protein 22... 0.02 OrthoFinder output from all 47 species
Solyc07g056300.1.1 Solyc07g056300 AT-hook motif nuclear-localized protein 16... 0.03 OrthoFinder output from all 47 species
Solyc08g079720.3.1 AHL22, Solyc08g079720 AT-hook motif nuclear-localized protein 22... 0.02 OrthoFinder output from all 47 species
Spa_g10063 No alias AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001193_P001 AHL20, Zm00001e001193 AT-hook motif nuclear-localized protein 22... 0.02 OrthoFinder output from all 47 species
Zm00001e007105_P001 Zm00001e007105 AT-hook motif nuclear-localized protein 23... 0.02 OrthoFinder output from all 47 species
Zm00001e021704_P001 Zm00001e021704 AT-hook motif nuclear-localized protein 23... 0.02 OrthoFinder output from all 47 species
Zm00001e023375_P001 AHL22, Zm00001e023375 AT-hook motif nuclear-localized protein 25... 0.02 OrthoFinder output from all 47 species
Zm00001e024863_P001 AHL22, Zm00001e024863 AT-hook motif nuclear-localized protein 23... 0.03 OrthoFinder output from all 47 species
Zm00001e040207_P002 Zm00001e040207 AT-hook motif nuclear-localized protein 21... 0.02 OrthoFinder output from all 47 species
Zm00001e041402_P001 Zm00001e041402 AT-hook motif nuclear-localized protein 21... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR005175 PPC_dom 194 308
No external refs found!