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  5. Cba_g74874

Cba_g74874


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g74874

Target Alias Description ECC score Gene Family Method Actions
AT5G65570 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g002869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003294 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07716 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20047 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21708 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g22000 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12663 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14569 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g24046 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g36223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06815 CRR2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g30849 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g16798 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g26948 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37347 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02659 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g05682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16410 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g16640 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g17427 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g68030 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene02568.t1 Aspi01Gene02568 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene07941.t1 LPA66, Aspi01Gene07941 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08612.t1 Aspi01Gene08612 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08990.t1 OTP84, Aspi01Gene08990 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14586.t1 Aspi01Gene14586 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24209.t1 VAC1, ECB2,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25991.t1 CRR22, Aspi01Gene25991 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene28610.t1 REME1, Aspi01Gene28610 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene31317.t1 CRR28, Aspi01Gene31317 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44213.t1 Aspi01Gene44213 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52031.t2 Aspi01Gene52031 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0251.g060294 No alias not classified & original description: CDS=1-879 0.01 OrthoFinder output from all 47 species
Cba_g05270 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07194 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g13329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14728 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15130 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20713 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26795 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67657 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g23468 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g28729 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36012 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g42967 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10089 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g16793 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g30334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36401 OTP86 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g47882 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g49904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16795 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g51019 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08167 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13686 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18533 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g36226 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g36343 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g37832 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03944 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g12623 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g27109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28692 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g31349 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g24894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g12401 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g57530 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07598 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g52857 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57818 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61794 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g05209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25357 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26489 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27130 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g46633 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g081560.2.1 Solyc01g081560 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Spa_g01102 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g07666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14539 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g21831 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006751 glutathione catabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016842 amidine-lyase activity IEP HCCA
BP GO:0042219 cellular modified amino acid catabolic process IEP HCCA
BP GO:0043171 peptide catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044273 sulfur compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 337 367
IPR002885 Pentatricopeptide_repeat 242 267
IPR002885 Pentatricopeptide_repeat 170 216
IPR002885 Pentatricopeptide_repeat 69 115
IPR002885 Pentatricopeptide_repeat 271 317
IPR002885 Pentatricopeptide_repeat 472 519
IPR002885 Pentatricopeptide_repeat 573 620
IPR002885 Pentatricopeptide_repeat 372 419
No external refs found!