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  5. Cba_g75402

Cba_g75402


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g75402

Target Alias Description ECC score Gene Family Method Actions
AT3G05340 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005637 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g023583 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110647 MEF21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07067 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26222 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33141 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01654.t1 PTAC9, OSB2,... ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02296.t1 Aspi01Gene02296 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34548.t1 Aspi01Gene34548 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34749.t1 Aspi01Gene34749 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69580.t1 Aspi01Gene69580 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.30G037100.1 Ceric.30G037100 not classified & original description: pacid=50608918... 0.03 OrthoFinder output from all 47 species
Dac_g35222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g44847 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24260 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13325 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17807 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Lfl_g05629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07374 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19879 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g39239 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10138132g0010 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.02 OrthoFinder output from all 47 species
MA_10721g0010 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_6329g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Msp_g31656 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05303 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25278 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g28119 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16060 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41731 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03426 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11085 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13232 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17174 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62956 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g02929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g03859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11913 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36251 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo105614 CRR2 Pentatricopeptide repeat-containing protein At3g02330,... 0.03 OrthoFinder output from all 47 species
Smo444974 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.02 OrthoFinder output from all 47 species
Smo92008 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.02 OrthoFinder output from all 47 species
Spa_g02212 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17860 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20412 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23272 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g31074 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g31905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019482_P001 Zm00001e019482 Pentatricopeptide repeat-containing protein At5g48910... 0.02 OrthoFinder output from all 47 species
Zm00001e034478_P001 Zm00001e034478 Pentatricopeptide repeat-containing protein At3g24000,... 0.03 OrthoFinder output from all 47 species
Zm00001e039394_P003 Zm00001e039394 Pentatricopeptide repeat-containing protein At5g04780,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 224 272
IPR002885 Pentatricopeptide_repeat 429 457
IPR002885 Pentatricopeptide_repeat 399 422
IPR002885 Pentatricopeptide_repeat 97 123
IPR002885 Pentatricopeptide_repeat 768 791
IPR002885 Pentatricopeptide_repeat 125 155
IPR002885 Pentatricopeptide_repeat 870 892
IPR002885 Pentatricopeptide_repeat 299 320
IPR002885 Pentatricopeptide_repeat 602 625
IPR002885 Pentatricopeptide_repeat 327 357
IPR002885 Pentatricopeptide_repeat 527 574
IPR002885 Pentatricopeptide_repeat 692 740
IPR002885 Pentatricopeptide_repeat 21 69
IPR002885 Pentatricopeptide_repeat 795 840
No external refs found!