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  5. Cba_g76971

Cba_g76971


Description : component *(eL32) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001000_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g76971

Target Alias Description ECC score Gene Family Method Actions
AT4G18100 No alias Ribosomal protein L32e 0.02 OrthoFinder output from all 47 species
AT5G46430 No alias Ribosomal protein L32e 0.03 OrthoFinder output from all 47 species
Adi_g018846 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Adi_g030118 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g17117 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0030.g024411 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ceric.22G081000.1 Ceric.22G081000 component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cre06.g289550 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Dcu_g35080 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
GSVIVT01005150001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
GSVIVT01021377001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Gb_36437 No alias component RPL32 of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os08g41300.1 LOC_Os08g41300 component RPL32 of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os09g32500.1 LOC_Os09g32500 component RPL32 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Mp7g12480.1 No alias component RPL32 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Pir_g61740 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Pp3c14_10580V3.1 Pp3c14_10580 Ribosomal protein L32e 0.03 OrthoFinder output from all 47 species
Pp3c1_32490V3.1 Pp3c1_32490 Ribosomal protein L32e 0.03 OrthoFinder output from all 47 species
Ppi_g47089 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Ppi_g52088 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g12910 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo146656 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Solyc02g070310.3.1 Solyc02g070310 component RPL32 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Solyc08g006900.3.1 Solyc08g006900 component RPL32 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Spa_g36775 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Tin_g00154 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Tin_g11973 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e021938_P001 Zm00001e021938 component RPL32 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Zm00001e034606_P001 Zm00001e034606 component RPL32 of LSU proteome component 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001515 Ribosomal_L32e 48 132
No external refs found!