Aliases : RPT1A
Description : regulatory component *(RPT1) of 26S proteasome & original description: none
Gene families : OG0004346 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004346_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G53750 | RPT1A | regulatory particle triple-A 1A | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g10482 | RPT1A | regulatory component *(RPT1) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g01687 | RPT1A | regulatory component *(RPT1) of 26S proteasome &... | 0.04 | OrthoFinder output from all 47 species | |
| Cre14.g625400 | RPT1A | Protein degradation.26S proteasome.regulatory... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g03314 | RPT1A | regulatory component *(RPT1) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_11942 | RPT1A | regulatory component RPT1 of 26S proteasome | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g09290.2 | RPT1A, LOC_Os06g09290 | regulatory component RPT1 of 26S proteasome | 0.04 | OrthoFinder output from all 47 species | |
| Mp2g04840.1 | RPT1A | regulatory component RPT1 of 26S proteasome | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e016066_P001 | RPT1A, Zm00001e016066 | regulatory component RPT1 of 26S proteasome | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e023743_P001 | RPT1A, Zm00001e023743 | regulatory component RPT1 of 26S proteasome | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005524 | ATP binding | IEA | Interproscan |
| MF | GO:0016887 | ATP hydrolysis activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005839 | proteasome core complex | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006308 | DNA catabolic process | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
| BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
| No external refs found! |
