Lfl_g39249


Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g39249

Target Alias Description ECC score Gene Family Method Actions
AT1G03510 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g005725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g068784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069257 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082256 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g112590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05682 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16505 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25552 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0015.g013978 CRR22 not classified & original description: CDS=1-2136 0.02 OrthoFinder output from all 47 species
Cba_g05763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G000100.1 REME1, Ceric.16G000100 not classified & original description: pacid=50589905... 0.03 OrthoFinder output from all 47 species
Dac_g04694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07635 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07790 MEF22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25283 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35870 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43925 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g45949 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g46027 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g17642 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os12g06650.1 LOC_Os12g06650 Pentatricopeptide repeat-containing protein At4g15720... 0.02 OrthoFinder output from all 47 species
Len_g17343 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35930 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g03801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04332 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g18562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22507 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g23050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31071 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g40831 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30346 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g38345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16061 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g46816 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57548 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08728 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53029 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53708 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g54174 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62239 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003060 No alias not classified & original description: CDS=1-2058 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0225.g026308 CRR22 ssDNA-binding protein *(OSB) & original description: CDS=95-2287 0.04 OrthoFinder output from all 47 species
Sam_g29285 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo93321 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Tin_g06098 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08535 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21797 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 185 232
IPR002885 Pentatricopeptide_repeat 262 284
IPR002885 Pentatricopeptide_repeat 290 316
No external refs found!