Lfl_g39398 (CRR21)


Aliases : CRR21

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g39398

Target Alias Description ECC score Gene Family Method Actions
AT4G31070 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g002798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004512 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g007536 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g013821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g028250 LOI1, MEF11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g032567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g033661 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035621 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g040866 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055693 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101334 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16565 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16833 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36185 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36200 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36487 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38174 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19262 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27593 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16115 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16838 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03412.t1 Aspi01Gene03412 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31801.t1 Aspi01Gene31801 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009227 No alias not classified & original description: CDS=1-1950 0.03 OrthoFinder output from all 47 species
Azfi_s0175.g055972 OTP86 not classified & original description: CDS=1-2742 0.03 OrthoFinder output from all 47 species
Cba_g06485 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G007000.1 Ceric.09G007000 not classified & original description: pacid=50586983... 0.02 OrthoFinder output from all 47 species
Ceric.18G049100.1 Ceric.18G049100 not classified & original description: pacid=50621467... 0.02 OrthoFinder output from all 47 species
Ceric.22G050700.1 Ceric.22G050700 not classified & original description: pacid=50614024... 0.04 OrthoFinder output from all 47 species
Dac_g03373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30446 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32437 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36032 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g44991 LOI1, MEF11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g45812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05769 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g36740 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06187 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07440 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09042 OTP80 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g19736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32657 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_863836g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Msp_g03121 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g23765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02370 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36408 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41642 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03100 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46816 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57343 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g62195 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63637 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63850 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27073 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g29654 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g46005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023175 No alias not classified & original description: CDS=1-2640 0.03 OrthoFinder output from all 47 species
Sam_g03383 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15522 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21956 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo100621 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Solyc12g042400.1.1 SLO1, Solyc12g042400 Pentatricopeptide repeat-containing protein At2g29760,... 0.02 OrthoFinder output from all 47 species
Spa_g05402 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g33712 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04750 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05621 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06630 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06631 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12958 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13649 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44852 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 154 176
IPR002885 Pentatricopeptide_repeat 179 226
IPR002885 Pentatricopeptide_repeat 281 327
IPR002885 Pentatricopeptide_repeat 75 121
No external refs found!