Lfl_g39436 (OPCL1)


Aliases : OPCL1

Description : not classified & original description: none


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g39436

Target Alias Description ECC score Gene Family Method Actions
Aop_g17436 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G077600.1 Ceric.11G077600 not classified & original description: pacid=50595629... 0.03 OrthoFinder output from all 47 species
Dcu_g17079 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_13602 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_18693 OPCL1 OPC-8:CoA synthetase 0.02 OrthoFinder output from all 47 species
Lfl_g01742 OPCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_8552247g0010 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g00701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07522 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005047 signal recognition particle binding IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 500 575
IPR000873 AMP-dep_Synth/Lig_com 48 491
No external refs found!