Lfl_g40090 (EMB2758)


Aliases : EMB2758

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g40090

Target Alias Description ECC score Gene Family Method Actions
Adi_g004513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034668 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g11263 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04109 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26694 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g45822 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37112 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25552 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18566.t1 Aspi01Gene18566 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22967.t2 Aspi01Gene22967 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58744.t1 EMB2758, Aspi01Gene58744 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0292.g063377 OTP86 not classified & original description: CDS=1-2337 0.03 OrthoFinder output from all 47 species
Cba_g06576 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10344 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g27620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g17077 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g43258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11110 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36054 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008922001 No alias Pentatricopeptide repeat-containing protein At4g08210... 0.02 OrthoFinder output from all 47 species
GSVIVT01033654001 No alias Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
LOC_Os11g17530.2 LOC_Os11g17530 Pentatricopeptide repeat-containing protein At2g37320... 0.03 OrthoFinder output from all 47 species
Len_g04337 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12295 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g47144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g50872 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05665 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06003 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12344 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04936 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23872 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32179 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g01500 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32582 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34280 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43620 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g59227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05062 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59346 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g025700.2.1 Solyc03g025700 OTP70 plastidial RNA splicing factor 0.04 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Solyc07g009220.2.1 Solyc07g009220 Pentatricopeptide repeat-containing protein At2g34400... 0.02 OrthoFinder output from all 47 species
Solyc09g009790.4.1 Solyc09g009790 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Solyc12g006575.1.1 OTP82, Solyc12g006575 RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
Spa_g09894 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12113 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17314 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45439 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014549_P001 CRR22, Zm00001e014549 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Zm00001e029819_P003 CRR22, Zm00001e029819 RNA editing factor (CRR22) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!