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  5. Lfl_g40602

Lfl_g40602


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g40602

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00175270 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g31790... 0.03 OrthoFinder output from all 47 species
AMTR_s00078p00195340 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
AT1G31920 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G66520 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g005549 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g019854 LPA66 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g034887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11263 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07887 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g12351 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16632 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17265 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g19914 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g24046 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33302 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g36208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36212 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g06724 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07454 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54909 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23671 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70449 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01199.t1 OTP86, Aspi01Gene01199 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07941.t1 LPA66, Aspi01Gene07941 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12870.t1 Aspi01Gene12870 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13980.t1 Aspi01Gene13980 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19500.t2 Aspi01Gene19500 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene27421.t1 Aspi01Gene27421 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene39631.t1 CRR2, Aspi01Gene39631 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene51735.t1 Aspi01Gene51735 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61369.t1 CRR22, Aspi01Gene61369 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64477.t1 OTP82, Aspi01Gene64477 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71933.t1 Aspi01Gene71933 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71934.t1 Aspi01Gene71934 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06483 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g70891 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.10G062000.1 Ceric.10G062000 ssDNA-binding protein *(OSB) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g05085 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25241 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28298 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g38653 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g04921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05349 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g05943 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g10759 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g15390 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46872 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g48000 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21131 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29034 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01008407001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
LOC_Os06g39650.1 LOC_Os06g39650 Pentatricopeptide repeat-containing protein At1g31430... 0.03 OrthoFinder output from all 47 species
LOC_Os09g07780.1 OTP84, LOC_Os09g07780 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Len_g17769 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06003 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06708 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07725 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g10905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15222 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g17292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_89214g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Msp_g03763 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g14034 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16041 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g27639 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38695 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g16678 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20288 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g01995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02838 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03334 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03427 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11835 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61389 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03120 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g16172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22860 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30634 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03223 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07430 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g44848 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53376 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003060 No alias not classified & original description: CDS=1-2058 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0093.g019124 No alias not classified & original description: CDS=1-405 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0097.g019430 No alias not classified & original description: CDS=1-4416 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0099.g019544 OSB3 ssDNA-binding protein *(OSB) & original description: CDS=30-812 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0133.g022243 No alias not classified & original description: CDS=1-1908 0.03 OrthoFinder output from all 47 species
Sam_g16371 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Smo118230 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
Smo122941 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Solyc03g025700.2.1 Solyc03g025700 OTP70 plastidial RNA splicing factor 0.03 OrthoFinder output from all 47 species
Solyc04g082870.1.1 Solyc04g082870 Pentatricopeptide repeat-containing protein At1g25360... 0.03 OrthoFinder output from all 47 species
Solyc06g068810.4.1 Solyc06g068810 Pentatricopeptide repeat-containing protein At5g50990... 0.03 OrthoFinder output from all 47 species
Spa_g15016 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26191 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45669 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54669 MEF9 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08462 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35678 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003605_P001 DOT4, Zm00001e003605 Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 8 38
IPR002885 Pentatricopeptide_repeat 412 440
IPR002885 Pentatricopeptide_repeat 753 777
IPR002885 Pentatricopeptide_repeat 384 410
IPR002885 Pentatricopeptide_repeat 651 672
IPR002885 Pentatricopeptide_repeat 208 255
IPR002885 Pentatricopeptide_repeat 107 154
IPR002885 Pentatricopeptide_repeat 680 726
IPR002885 Pentatricopeptide_repeat 594 624
IPR002885 Pentatricopeptide_repeat 308 357
IPR002885 Pentatricopeptide_repeat 444 491
No external refs found!