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  5. Lfl_g40989

Lfl_g40989


Description : subgroup ERF-V transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g40989
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00264660 ATERF3, ERF3,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00003p00135920 HRE2,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00010p00095120 ERF110,... Ethylene-responsive transcription factor ERF110... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00098700 ERF110,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00240320 LEP,... Ethylene-responsive transcription factor FZP OS=Oryza... 0.03 OrthoFinder output from all 47 species
AMTR_s00040p00195730 DREB1B, ATCBF1,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00069p00141520 CBF4, DREB1D,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AT1G15360 WIN1, SHN1 Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G28160 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G71130 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G77200 No alias Integrase-type DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G25390 SHN2 Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G61590 No alias Integrase-type DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g050305 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g00443 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14600 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Aev_g25772 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Aev_g26471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20728 CRF4 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04135 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Als_g10439 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g11527 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g20815 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Aob_g01979 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Aob_g04116 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Aob_g22889 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Aop_g07386 CRF4 subgroup ERF-VI transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08977 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Aop_g10334 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g11367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38416 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g62836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00525.t1 Aspi01Gene00525 subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02794.t1 RAP2.11, Aspi01Gene02794 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05365.t1 ORA47, Aspi01Gene05365 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene07735.t1 DREB2A, DREB2,... subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene11862.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene18475.t1 Aspi01Gene18475 subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18664.t1 TINY2, Aspi01Gene18664 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene23153.t1 DEAR1, CEJ1,... subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene25515.t1 DEAR1, CEJ1,... subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene41136.t1 CRF3, Aspi01Gene41136 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47256.t1 tny, Aspi01Gene47256 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene53867.t1 DEAR4, RAP2.10,... subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene56619.t1 RAP2.1, Aspi01Gene56619 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56620.t1 RAP2.9, DEAR5,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene56622.t1 RAP2.9, DEAR5,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63782.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene67758.t1 TINY2, Aspi01Gene67758 subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene69424.t1 Aspi01Gene69424 subgroup ERF-I transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene70900.t1 Aspi01Gene70900 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0013.g013216 No alias subgroup ERF-V transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g11441 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g32144 DREB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G018900.1 ERF2, ATERF2,... subgroup ERF-VI transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.19G028400.1 HRE2, Ceric.19G028400 not classified & original description: pacid=50576636... 0.04 OrthoFinder output from all 47 species
Ceric.28G035700.1 ATERF8, ATERF-8,... subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.29G030500.1 AtERF48, DREB2C,... subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.33G045200.1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.06 OrthoFinder output from all 47 species
Cre14.g620500 ESR1, DRN No description available 0.03 OrthoFinder output from all 47 species
Dac_g12673 No alias subgroup ERF-VI transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g46449 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g01289 ERF110 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02595 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Dcu_g14596 No alias subgroup ERF-I transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g12764 No alias subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Dde_g46772 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g15810 HRE2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26298 ATERF3, ERF3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01005747001 DRN-LIKE, ESR2,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01035911001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Gb_06962 ERF72, EBP, ATEBP, RAP2.3 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os02g10760.1 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.02 OrthoFinder output from all 47 species
LOC_Os02g38090.1 ESR1, DRN, LOC_Os02g38090 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os02g45420.1 LOC_Os02g45420 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os04g46410.1 ERF38, ATERF38,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os04g52090.1 ATERF-9, ERF9,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os05g41780.1 ATERF-9, ERF9,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os07g42510.1 RAP2.12, LOC_Os07g42510 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os08g07700.1 LOC_Os08g07700 Ethylene-responsive transcription factor ERF087... 0.02 OrthoFinder output from all 47 species
LOC_Os09g39810.1 LOC_Os09g39810 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os11g06770.2 ERF110, LOC_Os11g06770 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
LOC_Os11g13840.1 tny, LOC_Os11g13840 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_10242823g0010 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_10274g0010 Rap2.6L transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_10430231g0010 WIN1, SHN1 transcription factor (ERF). SHN-type cutin and suberin... 0.03 OrthoFinder output from all 47 species
MA_10432800g0010 No alias transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_12671g0020 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_166248g0020 ERF-1, ATERF-1 transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
MA_184464g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_23271g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_30120g0010 DRN-LIKE, ESR2,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
MA_66742g0010 HRD transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_81029g0010 ATERF4, RAP2.5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_8574268g0010 TINY2 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_9260020g0010 SHN3 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_9588449g0010 ERF1, ATERF1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp6g08690.1 TINY2 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Msp_g12537 CRF4 subgroup ERF-VI transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g43178 RAP2.9, DEAR5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09486 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g12944 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Nbi_g18180 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g03524 ORA47 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26909 RAP2.11 transcription factor *(ERN1) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g28444 ATERF12, ERF12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04273 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pir_g09341 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g18808 DEAR4, RAP2.10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37613 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g47937 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g60485 ATERF11, ERF11 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ppi_g00637 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006104 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013375 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Sam_g38211 No alias subgroup ERF-V transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g005630.3.1 RAP2.11, Solyc01g005630 transcription factor (ERF). transcription factor (ERN1) 0.02 OrthoFinder output from all 47 species
Solyc01g008880.3.1 CRF5, Solyc01g008880 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc01g067540.2.1 PUCHI, Solyc01g067540 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc02g077840.2.1 ATERF12, ERF12,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc04g072300.1.1 Solyc04g072300 Ethylene-responsive transcription factor FZP OS=Oryza... 0.02 OrthoFinder output from all 47 species
Solyc04g080910.1.1 Solyc04g080910 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc05g050790.3.1 ATERF13, ERF13,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc05g051180.3.1 ERF1, ATERF1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc05g052030.1.1 Solyc05g052030 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc08g007230.3.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc10g050970.1.1 RRTF1, Solyc10g050970 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Spa_g01688 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g04333 CRF3 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05596 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g39435 Rap2.6L not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04619 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06979 DREB26 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07037 DEAR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14637 No alias subgroup ERF-V transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26947 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Zm00001e000689_P001 Zm00001e000689 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e001139_P001 DREB26, Zm00001e001139 Ethylene-responsive transcription factor ERF014... 0.02 OrthoFinder output from all 47 species
Zm00001e002151_P001 HRD, Zm00001e002151 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e003800_P001 RRTF1, Zm00001e003800 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e015219_P001 Zm00001e015219 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e019026_P001 CRF3, Zm00001e019026 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e022864_P001 ESR1, DRN, Zm00001e022864 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e031438_P002 HRE2, Zm00001e031438 Ethylene-responsive transcription factor RAP2-3... 0.02 OrthoFinder output from all 47 species
Zm00001e033541_P001 Zm00001e033541 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e033790_P001 Zm00001e033790 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 7 56
No external refs found!