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  5. Lfl_g41280

Lfl_g41280 (PGP11)


Aliases : PGP11

Description : not classified & original description: none


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g41280

Target Alias Description ECC score Gene Family Method Actions
Ala_g16048 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17861 ABCB19,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18028 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26381 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27372 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g29011 PGP10 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g33590 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39233 ABCB19,... subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g12898 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24610 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08993 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14003 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15961.t1 ABCB19,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32170.t1 ABCB14,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene46795.t1 PGP2, Aspi01Gene46795 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.35G032800.1 ABCB19,... subfamily ABCB transporter & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g05431 ABCB19,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35671 ABCB19,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g41330 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20621 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03500 PGP6 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05513 PGP10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09158 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g29451 ABCB19,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47998 ABCB19,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13730 No alias subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01013125001 PGP2 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
LOC_Os01g34970.1 PGP11, LOC_Os01g34970 subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
LOC_Os08g05710.1 ABCB14,... subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Len_g18141 PGP10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10739 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33330 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_102299g0010 No alias Putative multidrug resistance protein OS=Oryza sativa... 0.09 OrthoFinder output from all 47 species
MA_10280832g0010 PGP11 ABC transporter B family member 7 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_10436810g0020 No alias subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species
MA_107576g0010 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
MA_93218g0020 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Msp_g36979 ABCB19,... subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g09833 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29606 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g37526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38310 PGP13 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g43029 PGP2 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g01345 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25857 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03992 ABCB19,... subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017899 PGP11 subfamily ABCB transporter & original description: CDS=362-4450 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017905 PGP11 not classified & original description: CDS=139-861 0.01 OrthoFinder output from all 47 species
Smo236972 ABCB19,... ABC transporter B family member 19 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Smo410515 ABCB19,... Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
Spa_g38761 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47519 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06701 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08424 PGP11 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g46427 ATPGP4, PGP4, ABCB4, MDR4 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 1 105
No external refs found!