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  5. Pnu_g01003

Pnu_g01003 (RSZ21, At-RSZ21,...)


Aliases : RSZ21, At-RSZ21, SRZ-21, SRZ21, RSZP21

Description : RNA splicing factor *(RSZ21/22) & original description: none


Gene families : OG0001173 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001173_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g01003

Target Alias Description ECC score Gene Family Method Actions
Adi_g073373 At-SR34, SRP34,... RNA splicing factor *(RSZ21/22) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g44647 No alias RNA splicing factor *(RSZ21/22) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g46558 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 5 68
IPR001878 Znf_CCHC 99 114
No external refs found!