Pnu_g01233

Description : E3 ubiquitin ligase & original description: none

Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g01233

Target	Alias	Description	ECC score	Gene Family Method
Als_g41669	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g16814	PUB26	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.08G042000.1	Ceric.08G042000	E3 ubiquitin ligase & original description:...	0.03	OrthoFinder output from all 47 species
Dcu_g11691	PUB26	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g46168	PUB23	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_10433846g0010	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Mp3g01700.1	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Nbi_g09512	PUB29, ATPUB29	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g33878	PUB26	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g33879	PUB26	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g44474	PUB25	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g27483	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c3_4891V3.1	PUB29, ATPUB29,...	plant U-box 26	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	HCCA
BP	GO:0006099	tricarboxylic acid cycle	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
MF	GO:0008964	phosphoenolpyruvate carboxylase activity	IEP	HCCA
BP	GO:0015977	carbon fixation	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	30	99

External Links

No external refs found!