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Pnu_g01319 (PUB13, ATPUB13)


Aliases : PUB13, ATPUB13

Description : E3 ubiquitin ligase & original description: none


Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Pnu_g01319

Target Alias Description ECC score Gene Family Method Actions
Ala_g02477 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g03880 ATPUB17, PUB17 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene69641.t1 PUB13, ATPUB13,... E3 ubiquitin ligase *(PUB8) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03347 PUB14, ATPUB14 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g11164 PUB12, AtPUB12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01036669001 No alias U-box domain-containing protein 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_10871 ATPUB17, PUB17 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
LOC_Os08g04470.1 PUB8, B80, LOC_Os08g04470 U-box domain-containing protein 8 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003613 Ubox_domain 254 324
IPR000225 Armadillo 423 461
IPR000225 Armadillo 464 502
IPR000225 Armadillo 382 420
No external refs found!