Pnu_g01538


Description : not classified & original description: none


Gene families : OG0000059 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g01538
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
Als_g23867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene54925.t1 Aspi01Gene54925 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31431 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05171 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01024127001 No alias Auxin-induced protein 15A OS=Glycine max 0.02 OrthoFinder output from all 47 species
GSVIVT01024130001 No alias Auxin-induced protein 10A5 OS=Glycine max 0.03 OrthoFinder output from all 47 species
Gb_31036 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Gb_39828 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os02g05050.1 LOC_Os02g05050 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os09g26610.1 LOC_Os09g26610 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_8351565g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_85990g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp6g13700.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Nbi_g29962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g13425 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19876 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0102.g019893 No alias not classified & original description: CDS=1-909 0.04 OrthoFinder output from all 47 species
Solyc11g011680.1.1 Solyc11g011680 Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g07591 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010130_P001 Zm00001e010130 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e037770_P001 Zm00001e037770 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009733 response to auxin IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0009317 acetyl-CoA carboxylase complex IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003676 SAUR_fam 27 129
No external refs found!