Pnu_g01563


Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g01563

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00107400 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g21065... 0.04 OrthoFinder output from all 47 species
Adi_g025491 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g20571 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g38989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g40130 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g15073 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07418 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g09002 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g17002 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g24214 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g26957 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g27603 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g31935 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g36666 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g36877 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37108 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g40871 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70449 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene43851.t1 Aspi01Gene43851 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000167 No alias not classified & original description: CDS=1-1701 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008403 EMB2758 not classified & original description: CDS=1-1560 0.02 OrthoFinder output from all 47 species
Azfi_s0008.g011342 No alias not classified & original description: CDS=1-1953 0.02 OrthoFinder output from all 47 species
Azfi_s0008.g011649 No alias not classified & original description: CDS=1-3195 0.02 OrthoFinder output from all 47 species
Azfi_s0028.g023878 No alias not classified & original description: CDS=1-2883 0.03 OrthoFinder output from all 47 species
Azfi_s0050.g030992 No alias not classified & original description: CDS=1-2877 0.02 OrthoFinder output from all 47 species
Azfi_s0069.g036571 No alias not classified & original description: CDS=1-1638 0.02 OrthoFinder output from all 47 species
Azfi_s0094.g043395 No alias not classified & original description: CDS=1-2703 0.02 OrthoFinder output from all 47 species
Azfi_s0143.g051490 No alias not classified & original description: CDS=1-2688 0.02 OrthoFinder output from all 47 species
Azfi_s0194.g057200 No alias not classified & original description: CDS=1-3033 0.03 OrthoFinder output from all 47 species
Azfi_s0197.g057356 No alias not classified & original description: CDS=1-2922 0.03 OrthoFinder output from all 47 species
Azfi_s0262.g060819 REME1 not classified & original description: CDS=1-1380 0.02 OrthoFinder output from all 47 species
Azfi_s0277.g061496 No alias not classified & original description: CDS=1-2121 0.02 OrthoFinder output from all 47 species
Azfi_s0282.g063034 No alias not classified & original description: CDS=389-4795 0.03 OrthoFinder output from all 47 species
Azfi_s0345.g065835 No alias not classified & original description: CDS=1-1926 0.02 OrthoFinder output from all 47 species
Azfi_s0889.g091250 No alias not classified & original description: CDS=1-2652 0.03 OrthoFinder output from all 47 species
Ceric.29G050000.1 Ceric.29G050000 ssDNA-binding protein *(OSB) & original description:... 0.05 OrthoFinder output from all 47 species
Dde_g47805 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01037562001 PDE247, CLB19 RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
LOC_Os05g37225.1 LOC_Os05g37225 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_109134g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_179801g0020 EMB2261 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_653417g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Msp_g03763 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28518 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g48531 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g35704 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013331 No alias not classified & original description: CDS=1-2106 0.04 OrthoFinder output from all 47 species
Smo112044 No alias Pentatricopeptide repeat-containing protein At2g34400... 0.03 OrthoFinder output from all 47 species
Solyc05g023900.1.1 Solyc05g023900 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Spa_g18446 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g44822 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g18426 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!