1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g01723

Pnu_g01723 (ATWBC11, ABCG11, DSO,...)


Aliases : ATWBC11, ABCG11, DSO, COF1, WBC11

Description : subfamily ABCG transporter & original description: none


Gene families : OG0000139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g01723
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s01529p00010210 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Aev_g18378 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g24453 ATWBC11, ABCG11,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g27208 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g12494 ATWBC11, ABCG11,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12769 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13814 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16729 ATWBC11, ABCG11,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g67465 ATWBC11, ABCG11,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10675.t1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10683.t1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20147.t1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene20148.t1 ATWBC11, ABCG11,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20191.t1 ATWBC11, ABCG11,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22403.t1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene49654.t2 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63590.t1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0123.g048389 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: CDS=25-2127 0.04 OrthoFinder output from all 47 species
Ceric.01G050000.1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.04G006500.1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.05G036700.1 ATWBC11, ABCG11,... not classified & original description: pacid=50577879... 0.03 OrthoFinder output from all 47 species
Ceric.06G041600.1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g14526 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g31044 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04812 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g45147 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Gb_08227 ATWBC11, ABCG11,... ABC transporter G family member 11 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_18403 ATWBC11, ABCG11,... suberin/cutin lipid exporter (DSO). wax lipid exporter... 0.04 OrthoFinder output from all 47 species
Gb_18495 ATWBC11, ABCG11,... ABC transporter G family member 11 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_21000 ATWBC11, ABCG11,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
LOC_Os09g29660.1 ATWBC11, ABCG11,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os12g22120.1 ATNAP12, NAP12,... ABC transporter G family member 12 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g11680 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22633 ATWBC11, ABCG11,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38580 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436774g0020 ATWBC11, ABCG11,... ABC transporter G family member 11 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_6104g0010 No alias ABC transporter G family member 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp2g16690.1 No alias subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Msp_g26300 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g03823 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27633 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57074 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c10_22200V3.1 ATWBC11, ABCG11,... ABC-2 type transporter family protein 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004343 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: CDS=978-3230 0.03 OrthoFinder output from all 47 species
Sam_g09328 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo171782 No alias Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Smo234186 ATWBC11, ABCG11,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Solyc01g105450.4.1 ATWBC11, ABCG11,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Solyc06g072100.3.1 ATWBC11, ABCG11,... ABC transporter G family member 11 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g07523 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16829 ATWBC11, ABCG11,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51405 ATWBC11, ABCG11,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g24519 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004489_P001 ATWBC11, ABCG11,... suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Zm00001e033298_P002 ATWBC11, ABCG11,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR043926 ABCG_dom 218 273
IPR013525 ABC_2_trans 340 552
IPR003439 ABC_transporter-like_ATP-bd 38 189
No external refs found!