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  5. Pnu_g01898

Pnu_g01898 (ABCG40, PDR12,...)


Aliases : ABCG40, PDR12, ATABCG40, ATPDR12

Description : not classified & original description: none


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g01898

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00225530 PIS1, ABCG37,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AT3G16340 PDR1, ATPDR1 pleiotropic drug resistance 1 0.03 OrthoFinder output from all 47 species
Ehy_g13671 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429038g0010 ATPDR7, PDR7 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
MA_12965g0010 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
MA_949447g0010 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 60 213
No external refs found!