Pnu_g02139


Description : not classified & original description: none


Gene families : OG0001957 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001957_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g02139

Target Alias Description ECC score Gene Family Method Actions
Aop_g01314 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.29G056300.1 Ceric.29G056300 not classified & original description: pacid=50625810... 0.02 OrthoFinder output from all 47 species
Dcu_g08686 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10384290g0020 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_169267g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g18502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e035399_P001 Zm00001e035399 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016435 rRNA (guanine) methyltransferase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031167 rRNA methylation IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0036265 RNA (guanine-N7)-methylation IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070475 rRNA base methylation IEP HCCA
BP GO:0070476 rRNA (guanine-N7)-methylation IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!