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  5. Pnu_g03120

Pnu_g03120


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g03120

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00084250 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g27110... 0.02 OrthoFinder output from all 47 species
AMTR_s00084p00089150 OTP86,... Pentatricopeptide repeat-containing protein At3g63370,... 0.03 OrthoFinder output from all 47 species
Adi_g004440 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033552 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11263 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35628 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g26953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27910 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14024 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16322 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20359 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26859 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27463 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28684 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g61599 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69562 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01199.t1 OTP86, Aspi01Gene01199 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10587.t1 CRR2, Aspi01Gene10587 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12035.t1 Aspi01Gene12035 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27883.t1 Aspi01Gene27883 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34698.t1 Aspi01Gene34698 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34785.t1 Aspi01Gene34785 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49895.t1 CRR22, Aspi01Gene49895 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64477.t1 OTP82, Aspi01Gene64477 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65777.t1 Aspi01Gene65777 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71933.t1 Aspi01Gene71933 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene71934.t1 Aspi01Gene71934 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0011.g012647 No alias not classified & original description: CDS=1-1956 0.04 OrthoFinder output from all 47 species
Azfi_s0015.g013865 No alias not classified & original description: CDS=1-1626 0.03 OrthoFinder output from all 47 species
Azfi_s0027.g023505 No alias not classified & original description: CDS=32-2620 0.03 OrthoFinder output from all 47 species
Azfi_s0074.g037480 OTP82 not classified & original description: CDS=1-1485 0.03 OrthoFinder output from all 47 species
Azfi_s0148.g053129 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2052 0.03 OrthoFinder output from all 47 species
Azfi_s0221.g058730 No alias not classified & original description: CDS=1-747 0.03 OrthoFinder output from all 47 species
Cba_g67421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04271 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g04715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15083 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g18772 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40230 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g42997 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12220 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g16929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03570 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g35700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17702 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17712 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01021403001 No alias Pentatricopeptide repeat-containing protein At3g14730... 0.02 OrthoFinder output from all 47 species
LOC_Os09g07780.1 OTP84, LOC_Os09g07780 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
Len_g01885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g50872 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54488 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06003 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06160 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06927 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g07681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07725 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12012 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12344 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g33305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40602 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g03763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28769 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06586 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25822 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27823 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01899 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04075 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15249 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20095 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g23954 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34904 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36349 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40050 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11821 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63866 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g64612 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g04449 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05632 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05733 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g29398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53362 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53563 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53918 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g56599 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59316 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59920 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0172.g024419 No alias not classified & original description: CDS=1-2448 0.03 OrthoFinder output from all 47 species
Sam_g03385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12533 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15563 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo125795 REME1 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Solyc04g079410.3.1 Solyc04g079410 ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
Solyc10g005090.3.1 Solyc10g005090 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Spa_g08093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14257 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15016 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g20273 LPA66 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26191 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g27671 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46875 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53488 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54669 MEF9 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55041 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 297 356
IPR002885 Pentatricopeptide_repeat 176 224
IPR002885 Pentatricopeptide_repeat 74 122
IPR032867 DYW_dom 392 484
IPR002885 Pentatricopeptide_repeat 252 275
No external refs found!