Pnu_g03476 (KCS4)

Aliases : KCS4

Description : 3-ketoacyl-CoA synthase *(KCS) & original description: none

Gene families : OG0000066 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g03476
Cluster	HCCA: Cluster_4

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00069p00182480	KCS4,...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.02	OrthoFinder output from all 47 species
AMTR_s00135p00117490	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.02	OrthoFinder output from all 47 species
Aev_g01295	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g03997	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g14972	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g43723	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g26435	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g11126	HIC, KCS13	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g21499	KCS1	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g01808	KCS1	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g29301	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g21100	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene15471.t1	KCS4, Aspi01Gene15471	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene52640.t1	HIC, KCS13,...	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene68525.t1	KCS4, Aspi01Gene68525	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0020.g015522	HIC, KCS13	3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1290	0.06	OrthoFinder output from all 47 species
Azfi_s0027.g023706	KCS10, FDH	3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1575	0.03	OrthoFinder output from all 47 species
Cba_g05231	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g18070	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g22393	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g02791	KCS1	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g09500	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g06566	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g28881	HIC, KCS13	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os03g12030.1	G2, POP1, KCS6,...	3-ketoacyl-CoA synthase (KCS)	0.02	OrthoFinder output from all 47 species
LOC_Os09g19650.1	KCS17, LOC_Os09g19650	3-ketoacyl-CoA synthase (KCS)	0.02	OrthoFinder output from all 47 species
LOC_Os10g07010.1	KCS1, LOC_Os10g07010	3-ketoacyl-CoA synthase (KCS)	0.02	OrthoFinder output from all 47 species
LOC_Os11g37900.1	KCS20, LOC_Os11g37900	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species
MA_10426106g0010	KCS4	3-ketoacyl-CoA synthase (KCS)	0.04	OrthoFinder output from all 47 species
MA_105806g0010	KCS11	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species
MA_43136g0010	KCS4	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species
MA_56709g0010	KCS4	3-ketoacyl-CoA synthase (KCS)	0.02	OrthoFinder output from all 47 species
Mp2g20220.1	KCS11	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species
Mp2g20240.1	KCS11	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species
Msp_g38044	KCS9	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g07470	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g09940	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g21412	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.04	OrthoFinder output from all 47 species
Pp3c4_2960V3.1	KCS4, Pp3c4_2960	3-ketoacyl-CoA synthase 4	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011062	HIC, KCS13	3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1464	0.03	OrthoFinder output from all 47 species
Smo75021	KCS11	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	OrthoFinder output from all 47 species
Smo79947	KCS4	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	OrthoFinder output from all 47 species
Solyc05g009270.4.1	G2, POP1, KCS6,...	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species
Spa_g05561	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g13099	KCS9	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g14746	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g37156	KCS2	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g51546	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e000476_P001	KCS20, Zm00001e000476	3-ketoacyl-CoA synthase (KCS)	0.04	OrthoFinder output from all 47 species
Zm00001e038699_P001	G2, POP1, KCS6,...	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013747	ACP_syn_III_C	407	488
IPR013601	FAE1_typ3_polyketide_synth	104	390

External Links

No external refs found!

Pnu_g03476 (KCS4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation