Pnu_g04353


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g04353

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00166520 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00023600 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g50270... 0.04 OrthoFinder output from all 47 species
AT1G31920 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G03380 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G22690 No alias CONTAINS InterPro DOMAIN/s: Protein of unknown function... 0.02 OrthoFinder output from all 47 species
AT4G18750 DOT4 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G06540 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g07468 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09324 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36536 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g07135 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g52616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23581.t1 Aspi01Gene23581 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001620 No alias not classified & original description: CDS=1-4653 0.04 OrthoFinder output from all 47 species
Azfi_s0004.g008393 CRR22 not classified & original description: CDS=1-1839 0.06 OrthoFinder output from all 47 species
Azfi_s0007.g011091 No alias not classified & original description: CDS=1-1857 0.05 OrthoFinder output from all 47 species
Azfi_s0008.g011443 No alias not classified & original description: CDS=1-2145 0.03 OrthoFinder output from all 47 species
Azfi_s0047.g030253 CRR22 not classified & original description: CDS=1-1500 0.08 OrthoFinder output from all 47 species
Cba_g06595 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07772 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.34G039000.1 Ceric.34G039000 not classified & original description: pacid=50623583... 0.02 OrthoFinder output from all 47 species
Dcu_g06831 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.1 OrthoFinder output from all 47 species
Dcu_g08424 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g21425 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g38425 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Dcu_g45756 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g03413 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g18823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os09g39970.1 LOC_Os09g39970 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Len_g03909 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18024 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18953 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19025 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19028 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56586 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03482 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07727 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g12162 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g36746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39111 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06837 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g21545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43943 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44153 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08265 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g10323 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g28136 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g08941 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40890 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g41304 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c17_4940V3.1 Pp3c17_4940 organellar single-stranded DNA binding protein 3 0.01 OrthoFinder output from all 47 species
Ppi_g01948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07449 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g39244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39260 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g44213 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56599 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0214.g026002 No alias not classified & original description: CDS=74-2389 0.03 OrthoFinder output from all 47 species
Sam_g28859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo113567 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Tin_g08973 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g24942 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR046848 E_motif 111 172
IPR032867 DYW_dom 209 248
IPR002885 Pentatricopeptide_repeat 1 25
IPR002885 Pentatricopeptide_repeat 31 58
IPR002885 Pentatricopeptide_repeat 68 91
IPR046849 Eplus_motif 178 200
No external refs found!