Pnu_g04533 (VAC1, ECB2, ATECB2)


Aliases : VAC1, ECB2, ATECB2

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g04533

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00170p00032020 OTP86,... Pentatricopeptide repeat-containing protein At5g16860... 0.02 OrthoFinder output from all 47 species
Adi_g005637 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g098810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g100823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g15170 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37820 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g44730 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g49640 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21860 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24412 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31193 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06720 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06911 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07812 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12661 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19303 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26681 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26781 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g29063 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33642 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g63667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36878 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37586 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03671 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07902 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19954 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g33058 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g39230 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68030 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0880.g091024 No alias not classified & original description: CDS=182-3622 0.03 OrthoFinder output from all 47 species
Cba_g03378 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05154 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06571 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07289 MEF21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20154 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g27620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29979 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g44509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17265 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g41962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g44713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45850 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50134 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22352 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26917 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033654001 No alias Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
Len_g04337 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18953 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g43024 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g54485 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03305 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03987 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05475 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05649 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06599 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07378 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09949 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g15171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33296 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g33303 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41395 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g45671 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g45690 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05303 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19414 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25096 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27949 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20147 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23526 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29069 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32582 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03100 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07329 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13386 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g39036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30296 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33734 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g06693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13232 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53964 MEF19 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62991 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008324 SNX1, ATSNX1 regulatory factor SNX1 of Retromer protein recycling... 0.04 OrthoFinder output from all 47 species
Sam_g24781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g009790.4.1 Solyc09g009790 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Spa_g44822 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06329 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g18930 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 566 614
IPR002885 Pentatricopeptide_repeat 132 179
IPR002885 Pentatricopeptide_repeat 334 381
IPR002885 Pentatricopeptide_repeat 466 512
IPR002885 Pentatricopeptide_repeat 232 280
IPR002885 Pentatricopeptide_repeat 409 435
IPR002885 Pentatricopeptide_repeat 75 97
IPR002885 Pentatricopeptide_repeat 308 333
IPR002885 Pentatricopeptide_repeat 103 131
No external refs found!