Description : component *(bL35c) of large plastid ribosomal-subunit proteome & original description: none
Gene families : OG0006536 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006536_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pnu_g04836 | |
| Cluster | HCCA: Cluster_4 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G24090 | No alias | Ribosomal protein L35 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g032989 | No alias | component *(bL35c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g18112 | No alias | component *(bL35c) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g00423 | No alias | component *(bL35c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.15G044500.1 | Ceric.15G044500 | component *(bL35c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Cre04.g217932 | No alias | Protein biosynthesis.organelle translation... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g43056 | No alias | component *(bL35c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01012561001 | No alias | Protein biosynthesis.organelle translation... | 0.01 | OrthoFinder output from all 47 species | |
| MA_181338g0010 | No alias | component psRPL35 of large ribosomal subunit proteome | 0.03 | OrthoFinder output from all 47 species | |
| Mp5g05850.1 | No alias | component psRPL35 of large ribosomal subunit proteome | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g18684 | No alias | component *(bL35c) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g19900 | No alias | component *(bL35c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Smo444022 | No alias | Protein biosynthesis.organelle translation... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc07g006000.3.1 | Solyc07g006000 | component psRPL35 of large ribosomal subunit proteome | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g24771 | No alias | component *(bL35c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e037448_P001 | Zm00001e037448 | component psRPL35 of large ribosomal subunit proteome | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| BP | GO:0006412 | translation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006465 | signal peptide processing | IEP | HCCA |
| MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
| CC | GO:0009512 | cytochrome b6f complex | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009522 | photosystem I | IEP | HCCA |
| CC | GO:0009538 | photosystem I reaction center | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| BP | GO:0016485 | protein processing | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| BP | GO:0030001 | metal ion transport | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0051604 | protein maturation | IEP | HCCA |
| CC | GO:0070069 | cytochrome complex | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR021137 | Ribosomal_L35 | 65 | 122 |
| No external refs found! |
