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  5. Pnu_g05648

Pnu_g05648


Description : bHLH-type transcription factor & original description: none


Gene families : OG0000725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000725_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g05648

Target Alias Description ECC score Gene Family Method Actions
AT1G31050 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g31842 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09878 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g33477 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g01494 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01038142001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Gb_33415 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os04g47810.1 LOC_Os04g47810 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
LOC_Os05g42180.1 LOC_Os05g42180 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Msp_g15621 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g39581 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g51301 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g084880.3.1 Solyc02g084880 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Spa_g15320 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g41831 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027157_P001 Zm00001e027157 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!