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  5. Pnu_g05860

Pnu_g05860


Description : SMARCJ component *(BDH) of SWI/SNF chromatin remodeling complex & original description: none


Gene families : OG0004106 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004106_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g05860
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Aop_g35880 No alias SMARCJ component *(BDH) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Cba_g10288 No alias SMARCJ component *(BDH) of SWI/SNF chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Ceric.04G050800.1 Ceric.04G050800 SMARCJ component *(BDH) of SWI/SNF chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Solyc12g014480.2.1 Solyc12g014480 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g37224 No alias SMARCJ component *(BDH) of SWI/SNF chromatin remodeling... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!