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  5. Pnu_g05976

Pnu_g05976 (CP12, CP12-2)


Aliases : CP12, CP12-2

Description : regulatory protein *(CP12) of GAPDH activity & original description: none


Gene families : OG0002170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002170_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g05976

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00175560 CP12, CP12-2,... Calvin cycle protein CP12-2, chloroplastic... 0.06 OrthoFinder output from all 47 species
Adi_g048511 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.04 OrthoFinder output from all 47 species
Ala_g00257 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.05 OrthoFinder output from all 47 species
Aob_g00251 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.04 OrthoFinder output from all 47 species
Aop_g10777 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.05 OrthoFinder output from all 47 species
Ceric.15G075300.1 CP12, CP12-2,... regulatory protein *(CP12) of GAPDH activity & original... 0.03 OrthoFinder output from all 47 species
Cre08.g380250 CP12-1, CP12 Calvin cycle protein CP12, chloroplastic... 0.01 OrthoFinder output from all 47 species
Dac_g12215 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.04 OrthoFinder output from all 47 species
Dac_g32821 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.03 OrthoFinder output from all 47 species
Dcu_g22530 CP12-3 regulatory protein *(CP12) of GAPDH activity & original... 0.06 OrthoFinder output from all 47 species
Dcu_g34639 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.03 OrthoFinder output from all 47 species
Dcu_g40442 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.05 OrthoFinder output from all 47 species
Dde_g03082 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.05 OrthoFinder output from all 47 species
Gb_03515 CP12, CP12-2 Calvin cycle protein CP12-2, chloroplastic... 0.05 OrthoFinder output from all 47 species
LOC_Os01g19740.1 CP12-1, CP12,... Calvin cycle protein CP12-2, chloroplastic... 0.02 OrthoFinder output from all 47 species
Len_g42311 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.05 OrthoFinder output from all 47 species
MA_524595g0010 CP12, CP12-2 Calvin cycle protein CP12-2, chloroplastic... 0.05 OrthoFinder output from all 47 species
Mp2g10550.1 CP12-3 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Msp_g10264 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.03 OrthoFinder output from all 47 species
Nbi_g01618 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.04 OrthoFinder output from all 47 species
Ore_g08879 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.03 OrthoFinder output from all 47 species
Ore_g22166 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.04 OrthoFinder output from all 47 species
Pir_g14932 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.04 OrthoFinder output from all 47 species
Ppi_g53465 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.02 OrthoFinder output from all 47 species
Sam_g23904 No alias regulatory protein *(CP12) of GAPDH activity & original... 0.02 OrthoFinder output from all 47 species
Smo105078 CP12-1, CP12 Calvin cycle protein CP12-1, chloroplastic... 0.03 OrthoFinder output from all 47 species
Spa_g00117 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.04 OrthoFinder output from all 47 species
Spa_g04578 CP12-1, CP12 regulatory protein *(CP12) of GAPDH activity & original... 0.04 OrthoFinder output from all 47 species
Tin_g09684 CP12, CP12-2 regulatory protein *(CP12) of GAPDH activity & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004109 coproporphyrinogen oxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!