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  5. Pnu_g06094

Pnu_g06094


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g06094
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00046850 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
AT2G37320 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g111214 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20856 OSB4 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05980 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g19004 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g21502 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g06681 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0236.g059498 No alias not classified & original description: CDS=1-2331 0.05 OrthoFinder output from all 47 species
Azfi_s0579.g078277 No alias not classified & original description: CDS=1-1956 0.04 OrthoFinder output from all 47 species
Azfi_s1721.g106131 No alias not classified & original description: CDS=1-2793 0.04 OrthoFinder output from all 47 species
Azfi_s4317.g118723 No alias ssDNA-binding protein *(OSB) & original description: CDS=173-1369 0.06 OrthoFinder output from all 47 species
Cba_g04966 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05214 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g11364 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.26G013000.1 Ceric.26G013000 not classified & original description: pacid=50600010... 0.06 OrthoFinder output from all 47 species
Ceric.27G000800.1 Ceric.27G000800 not classified & original description: pacid=50605275... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021035.24 No alias Pentatricopeptide repeat-containing protein At1g63080,... 0.01 OrthoFinder output from all 47 species
Dac_g22650 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g23263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30276 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g30446 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43165 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06332 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g17208 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17224 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g21447 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g50575 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g50757 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g09988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g52475.1 LOC_Os03g52475 Pentatricopeptide repeat-containing protein At3g28660... 0.03 OrthoFinder output from all 47 species
LOC_Os11g29360.1 OTP82, LOC_Os11g29360 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Len_g05268 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g07823 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10429069g0010 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
MA_16823g0010 CRR22 RNA editing factor (MEF19) 0.03 OrthoFinder output from all 47 species
MA_64083g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_8678g0010 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
MA_9415113g0010 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
MA_95507g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Msp_g31919 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g40822 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45690 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g47042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16805 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g20126 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g16142 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32582 EMB2261 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g33469 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32595 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g05115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11012 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57919 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61853 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005124 No alias not classified & original description: CDS=63-833 0.05 OrthoFinder output from all 47 species
Spa_g21545 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26720 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g27046 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g44700 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e023289_P001 Zm00001e023289 Pentatricopeptide repeat-containing protein At1g31920... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR046849 Eplus_motif 108 134
IPR032867 DYW_dom 138 230
IPR046848 E_motif 40 102
IPR002885 Pentatricopeptide_repeat 1 21
No external refs found!