Aliases : ATHDA14, hda14
Description : class-II histone deacetylase & original description: none
Gene families : OG0006068 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006068_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00054p00095350 | ATHDA14, hda14,... | Chromatin organisation.histone modifications.histone... | 0.02 | OrthoFinder output from all 47 species | |
| AT4G33470 | ATHDA14, hda14 | histone deacetylase 14 | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g03857 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g53688 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g17399 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g38945 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g00560 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01026467001 | ATHDA14, hda14 | Chromatin organisation.histone modifications.histone... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os12g08220.1 | ATHDA14, hda14,... | class-II histone deacetylase | 0.03 | OrthoFinder output from all 47 species | |
| MA_10435687g0010 | ATHDA14, hda14 | class-II histone deacetylase | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g18920 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g10669 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo448239 | ATHDA14, hda14 | Chromatin organisation.histone modifications.histone... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g11637 | ATHDA14, hda14 | class-II histone deacetylase & original description: none | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004045 | aminoacyl-tRNA hydrolase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
| BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0008519 | ammonium transmembrane transporter activity | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| MF | GO:0015299 | obsolete solute:proton antiporter activity | IEP | HCCA |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| MF | GO:0046422 | violaxanthin de-epoxidase activity | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| BP | GO:0072488 | ammonium transmembrane transport | IEP | HCCA |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | HCCA |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023801 | His_deacetylse_dom | 113 | 417 |
| No external refs found! |
