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  5. Pnu_g06508

Pnu_g06508


Description : not classified & original description: none


Gene families : OG0000143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g06508
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
Adi_g003209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07175 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g31132 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g31327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g13592 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g21764 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g55983 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G008400.1 Ceric.03G008400 not classified & original description: pacid=50572986... 0.01 OrthoFinder output from all 47 species
Ceric.38G003400.1 Ceric.38G003400 not classified & original description: pacid=50580583... 0.01 OrthoFinder output from all 47 species
Ceric.38G028700.1 Ceric.38G028700 not classified & original description: pacid=50579312... 0.01 OrthoFinder output from all 47 species
GSVIVT01006248001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_04439 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os10g28210.1 LOC_Os10g28210 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g25020.1 LOC_Os11g25020 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g40985 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g01755 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10117499g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10431841g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003040 No alias not classified & original description: CDS=1-1485 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014461 No alias not classified & original description: CDS=1-1647 0.02 OrthoFinder output from all 47 species
Solyc03g006410.3.1 Solyc03g006410 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc06g005480.3.1 Solyc06g005480 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e000474_P001 Zm00001e000474 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e032942_P001 Zm00001e032942 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0009317 acetyl-CoA carboxylase complex IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 101 303
No external refs found!