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  5. Pnu_g06589

Pnu_g06589


Description : not classified & original description: none


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g06589
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AT1G68300 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g01816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g44724 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05601 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08676 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17854 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g35791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g69451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29654.t1 Aspi01Gene29654 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20927 RD2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28856 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_20328 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g32780.1 LOC_Os01g32780 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g47650.1 RD2, LOC_Os02g47650 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g52314.1 LOC_Os02g52314 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g07810.1 LOC_Os05g07810 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g28740.1 LOC_Os05g28740 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g12685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g48312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g27197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10063081g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10431338g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10435390g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_108930g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_720108g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g00168 RD2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04229 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000709 No alias not classified & original description: CDS=1-528 0.03 OrthoFinder output from all 47 species
Sam_g15632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo123808 No alias No description available 0.03 OrthoFinder output from all 47 species
Spa_g00638 ATPHOS34, PHOS34 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004357 glutamate-cysteine ligase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 11 164
No external refs found!