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  5. Pnu_g06643

Pnu_g06643 (XIF, ATMYO5, ATXIF)


Aliases : XIF, ATMYO5, ATXIF

Description : not classified & original description: none


Gene families : OG0000203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g06643
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
Ala_g18391 ATMYA1, XI-1, MYA1 class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Als_g13947 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g011224 ATVIIIA, VIIIA not classified & original description: CDS=656-2908 0.03 OrthoFinder output from all 47 species
Azfi_s0069.g036557 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Azfi_s0793.g087255 ATXIK, XI-17, XIK not classified & original description: CDS=258-4499 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000189.32 ATVIIIA, VIIIA Myosin-7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g04999 ATXIE, XIE not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23084 ATVIIIA, VIIIA not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01028990001 XI-8, XI-B, XIB, ATXIB Cytoskeleton.microfilament network.myosin... 0.03 OrthoFinder output from all 47 species
Len_g29954 XI-15, ATXI-I, XI-I class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Mp8g04010.1 ATXIK, XI-17, XIK C3H zinc finger transcription factor. class XI myosin... 0.03 OrthoFinder output from all 47 species
Sam_g18055 No alias class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Tin_g12705 ATVIIIA, VIIIA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012044_P001 XIF, ATMYO5,... class XI myosin microfilament-based motor protein 0.02 OrthoFinder output from all 47 species
Zm00001e016565_P002 Zm00001e016565 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016459 myosin complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
InterPro domains Description Start Stop
IPR001609 Myosin_head_motor_dom 64 240
No external refs found!