Pnu_g06791 (AL5)

Aliases : AL5

Description : methylation reader Alfin of PRC1 complex & original description: none

Gene families : OG0000258 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000258_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g06791

Target	Alias	Description	ECC score	Gene Family Method
AT1G14510	AL7	alfin-like 7	0.02	OrthoFinder output from all 47 species
AT5G26210	AL4	alfin-like 4	0.03	OrthoFinder output from all 47 species
Adi_g008297	AL7	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Adi_g011436	AL7	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Ala_g10202	AL1	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Als_g05455	AL2	methylation reader Alfin of PRC1 complex & original...	0.04	OrthoFinder output from all 47 species
Als_g06205	AL2	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene43079.t2	AL2, Aspi01Gene43079	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0093.g043317	AL1	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0244.g059922	AL2	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Cba_g70690	AL1	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Ehy_g07407	AL2	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01015122001	AL5	RNA biosynthesis.transcriptional activation.Alfin-like...	0.03	OrthoFinder output from all 47 species
Gb_22969	AL5	Alfin-like transcription factor	0.01	OrthoFinder output from all 47 species
LOC_Os02g35600.1	AL4, LOC_Os02g35600	Alfin-like transcription factor	0.02	OrthoFinder output from all 47 species
MA_10430651g0010	AL5	Alfin-like transcription factor	0.03	OrthoFinder output from all 47 species
Solyc01g102760.3.1	AL6, Solyc01g102760	Alfin-like transcription factor	0.02	OrthoFinder output from all 47 species
Solyc05g032770.4.1	AL5, Solyc05g032770	Alfin-like transcription factor	0.02	OrthoFinder output from all 47 species
Solyc12g096040.3.1	AL4, Solyc12g096040	Alfin-like transcription factor	0.04	OrthoFinder output from all 47 species
Spa_g17689	AL1	methylation reader Alfin of PRC1 complex & original...	0.04	OrthoFinder output from all 47 species
Zm00001e014851_P004	AL5, Zm00001e014851	Alfin-like transcription factor	0.02	OrthoFinder output from all 47 species
Zm00001e021294_P001	AL7, Zm00001e021294	Alfin-like transcription factor	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0042393	histone binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0008483	transaminase activity	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0031072	heat shock protein binding	IEP	HCCA
MF	GO:0031369	translation initiation factor binding	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR021998	Alfin_N	9	134
IPR019787	Znf_PHD-finger	189	238

External Links

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Pnu_g06791 (AL5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation