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  5. Pnu_g06958

Pnu_g06958


Description : not classified & original description: none


Gene families : OG0000220 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000220_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g06958

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0034.g025400 No alias not classified & original description: CDS=134-4453 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000042.101 No alias Dynein beta chain, flagellar outer arm OS=Chlamydomonas... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000042.99 No alias Dynein beta chain, flagellar outer arm OS=Chlamydomonas... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000142.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000142.7 No alias Cytoskeleton.microtubular network.Dynein... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000169.13 No alias Dynein-1-beta heavy chain, flagellar inner arm I1... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001206.1 No alias Dynein gamma chain, flagellar outer arm OS=Chlamydomonas... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020943.88 No alias Cytoskeleton.microtubular network.Dynein... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021350.41 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021590.1 No alias Cytoplasmic dynein 2 heavy chain 1 OS=Chlamydomonas reinhardtii 0.01 OrthoFinder output from all 47 species
Gb_31253 No alias Dynein-1-beta heavy chain, flagellar inner arm I1... 0.03 OrthoFinder output from all 47 species
Pp3c17_1950V3.1 Pp3c17_1950 No annotation 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0139.g022640 No alias heavy chain of Dynein microtubule-based motor protein... 0.03 OrthoFinder output from all 47 species
Sam_g33675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR013594 Dynein_heavy_tail 290 849
No external refs found!