1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g07156

Pnu_g07156 (UBQ11)


Aliases : UBQ11

Description : UBQ ubiquitin-fold protein & original description: none


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g07156

Target Alias Description ECC score Gene Family Method Actions
Ala_g09402 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g21615 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G024100.1 UBQ11, Ceric.05G024100 UBQ ubiquitin-fold protein & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.12G071900.1 Ceric.12G071900 not classified & original description: pacid=50600522... 0.03 OrthoFinder output from all 47 species
Cre07.g317050 No alias Polyubiquitin (Fragment) OS=Acetabularia peniculus 0.02 OrthoFinder output from all 47 species
Dac_g21914 UBQ4 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21915 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os09g25320.1 RUB1, ATRUB1,... ubiquitin-fold protein (RUB) 0.03 OrthoFinder output from all 47 species
LOC_Os09g27930.1 LOC_Os09g27930 component RPL40 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Len_g18800 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g43028 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16415 UBQ11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55284 UBQ4 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07364 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Zm00001e034164_P001 RUB1, ATRUB1,... ubiquitin-fold protein (RUB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 142 182
IPR000626 Ubiquitin-like_dom 66 137
IPR000626 Ubiquitin-like_dom 1 61
No external refs found!