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  5. Pnu_g07223

Pnu_g07223 (TET8)


Aliases : TET8

Description : not classified & original description: none


Gene families : OG0000199 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000199_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g07223

Target Alias Description ECC score Gene Family Method Actions
AT3G12090 TET6 tetraspanin6 0.03 OrthoFinder output from all 47 species
AT4G28050 TET7 tetraspanin7 0.03 OrthoFinder output from all 47 species
Aev_g00926 TET1, TRN2 regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
Ceric.01G090700.1 TET8, Ceric.01G090700 not classified & original description: pacid=50593002... 0.03 OrthoFinder output from all 47 species
Ceric.01G090800.1 TET8, Ceric.01G090800 not classified & original description: pacid=50591790... 0.04 OrthoFinder output from all 47 species
Dcu_g37351 TET10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24827 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
Ehy_g14453 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
GSVIVT01016305001 No alias Tetraspanin-5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_26509 TET1, TRN2 Protein TORNADO 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os09g25760.1 TET8, LOC_Os09g25760 Tetraspanin-8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_331856g0010 TET10 Tetraspanin-10 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g07222 TET1, TRN2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo231326 TET4 Tetraspanin-3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc03g059390.3.1 TET2, Solyc03g059390 Tetraspanin-2 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Solyc12g038410.2.1 TET7, Solyc12g038410 Tetraspanin-7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e004417_P001 TET10, Zm00001e004417 Tetraspanin-10 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e028243_P001 TET6, Zm00001e028243 Tetraspanin-6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e029484_P001 TET6, Zm00001e029484 Tetraspanin-6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR018499 Tetraspanin/Peripherin 7 249
No external refs found!