Pnu_g07883

Description : component *(eL19) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0001435 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001435_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g07883
Cluster	HCCA: Cluster_77

Target	Alias	Description	ECC score	Gene Family Method
Azfi_s0627.g079994	No alias	component *(eL19) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Cre02.g075700	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.01	OrthoFinder output from all 47 species
Dcu_g41239	No alias	component *(eL19) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
MA_1839g0010	emb2386	component RPL19 of LSU proteome component	0.02	OrthoFinder output from all 47 species
MA_22977g0010	emb2386	component RPL19 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Mp7g09050.1	No alias	component RPL19 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Zm00001e013683_P001	emb2386, Zm00001e013683	component RPL19 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Zm00001e025202_P001	Zm00001e025202	component RPL19 of LSU proteome component	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
CC	GO:0005789	endoplasmic reticulum membrane	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007029	endoplasmic reticulum organization	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000196	Ribosomal_L19/L19e	4	145

External Links

No external refs found!

Pnu_g07883

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation