1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g08039

Pnu_g08039 (EFR)


Aliases : EFR

Description : not classified & original description: none


Gene families : OG0000133 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g08039
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
AT1G33590 No alias Leucine-rich repeat (LRR) family protein 0.02 OrthoFinder output from all 47 species
Aop_g08585 RLP27, AtRLP27 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19475.t1 AtRLP35, RLP35,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01024435001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01028766001 No alias Receptor-like protein EIX1 OS=Solanum lycopersicum 0.05 OrthoFinder output from all 47 species
Gb_11560 No alias LRR receptor-like serine/threonine-protein kinase GSO1... 0.02 OrthoFinder output from all 47 species
Gb_26564 AtRLP6, RLP6 Receptor-like protein EIX2 OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
LOC_Os02g39660.1 LOC_Os02g39660 LRR receptor-like serine/threonine-protein kinase EFR... 0.02 OrthoFinder output from all 47 species
LOC_Os11g35960.1 LOC_Os11g35960 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10430058g0010 RLP7, AtRLP7 no description available(sp|q9srl7|rlp35_arath : 113.0) 0.03 OrthoFinder output from all 47 species
MA_173608g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_389168g0010 No alias Probable LRR receptor-like serine/threonine-protein... 0.05 OrthoFinder output from all 47 species
MA_6885657g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_7428118g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9854158g0010 No alias no description available(sp|q9srl7|rlp35_arath : 111.0) 0.03 OrthoFinder output from all 47 species
Mp2g24030.1 AtRLP30, RLP30 LRR receptor-like serine/threonine-protein kinase FLS2... 0.02 OrthoFinder output from all 47 species
Mp4g03660.1 GSO2, EDA23 LRR receptor-like serine/threonine-protein kinase GSO1... 0.03 OrthoFinder output from all 47 species
Mp5g13350.1 RLP32, AtRLP32 Probably inactive leucine-rich repeat receptor-like... 0.02 OrthoFinder output from all 47 species
Solyc07g008620.1.1 Solyc07g008620 Receptor-like protein EIX1 OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Solyc10g052880.1.1 Solyc10g052880 Probably inactive leucine-rich repeat receptor-like... 0.02 OrthoFinder output from all 47 species
Solyc12g005610.3.1 Solyc12g005610 Receptor-like protein EIX2 OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Zm00001e010148_P001 Zm00001e010148 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e010149_P001 RLP32, AtRLP32,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e011225_P001 Zm00001e011225 Receptor-like protein EIX2 OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Zm00001e020856_P001 Zm00001e020856 Receptor-like protein EIX2 OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 257 317
IPR001611 Leu-rich_rpt 529 589
IPR001611 Leu-rich_rpt 355 376
IPR013210 LRR_N_plant-typ 40 76
No external refs found!