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  5. Pnu_g08145

Pnu_g08145 (PGP11)


Aliases : PGP11

Description : subfamily ABCB transporter & original description: none


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g08145
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AT1G27940 PGP13 P-glycoprotein 13 0.03 OrthoFinder output from all 47 species
AT5G46540 PGP7 P-glycoprotein 7 0.04 OrthoFinder output from all 47 species
Aev_g20043 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36024 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05763 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51317 ABCB19,... ABC-B-type transporter *(AMN3) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06806 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23739 ABCB19,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21301 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08658 PGP6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g50160.1 PGP11, LOC_Os01g50160 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os02g46680.1 PGP2, LOC_Os02g46680 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
LOC_Os03g17180.1 PGP20, LOC_Os03g17180 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Len_g14182 PGP13 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16192 PGP2 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g21852 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_126766g0010 PGP2 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
MA_6870g0010 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Mp2g06270.1 PGP20 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Mp2g21430.1 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Msp_g01686 PGP6 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35589 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60298 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g03721 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g04479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g087410.4.1 Solyc02g087410 subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Solyc06g009290.4.1 PGP21, Solyc06g009290 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Solyc08g076720.4.1 PGP2, Solyc08g076720 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Spa_g47519 PGP2 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007065_P001 ABCB19,... ABC transporter B family member 19 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e020073_P001 ATPGP4, PGP4,... subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Zm00001e023274_P001 PGP2, Zm00001e023274 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Zm00001e026434_P002 PGP11, Zm00001e026434 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Zm00001e041008_P003 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Zm00001e041087_P002 Zm00001e041087 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004057 arginyltransferase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016598 protein arginylation IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019566 arabinose metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046373 L-arabinose metabolic process IEP HCCA
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 1096 1241
IPR003439 ABC_transporter-like_ATP-bd 417 565
IPR011527 ABC1_TM_dom 752 1023
IPR011527 ABC1_TM_dom 74 348
No external refs found!