Aliases : SPD1
Description : not classified & original description: none
Gene families : OG0001410 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001410_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pnu_g08230 | |
| Cluster | HCCA: Cluster_99 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g088713 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g108757 | SPD1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g112939 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g30094 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g07290 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g18245 | SPD1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g03538 | SPD1 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.08G016100.1 | Ceric.08G016100 | not classified & original description: pacid=50637973... | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.34G074300.1 | SPD1, Ceric.34G074300 | not classified & original description: pacid=50622982... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001215.19 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g01740 | SPD1 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g11178 | SPD1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g02694 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ehy_g18471 | SPD1 | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01016194001 | SPD1 | No description available | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os06g06190.1 | LOC_Os06g06190 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g10640.1 | LOC_Os12g10640 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| MA_10427944g0010 | SPD1 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_10433691g0010 | SPD1 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Mp5g22990.1 | SPD1 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g02253 | SPD1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g08814 | SPD1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g48536 | SPD1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g17912 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo104906 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Smo410877 | SPD1 | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g014150.3.1 | Solyc12g014150 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g13947 | SPD1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e000530_P004 | Zm00001e000530 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e030045_P004 | Zm00001e030045 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009522 | photosystem I | IEP | HCCA |
| CC | GO:0009538 | photosystem I reaction center | IEP | HCCA |
| BP | GO:0009719 | response to endogenous stimulus | IEP | HCCA |
| BP | GO:0009725 | response to hormone | IEP | HCCA |
| BP | GO:0009733 | response to auxin | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0010033 | response to organic substance | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0042221 | response to chemical | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR045735 | Spore_III_AA_AAA+_ATPase | 190 | 339 |
| No external refs found! |
