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  5. Pnu_g08298

Pnu_g08298


Description : not classified & original description: none


Gene families : OG0001442 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001442_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g08298

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00122220 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G45688 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.06 OrthoFinder output from all 47 species
AT3G08490 No alias BEST Arabidopsis thaliana protein match is: Late... 0.02 OrthoFinder output from all 47 species
Adi_g103178 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22107.t1 Aspi01Gene22107 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene51693.t1 Aspi01Gene51693 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0117.g046456 No alias not classified & original description: CDS=162-1187 0.04 OrthoFinder output from all 47 species
Cba_g07489 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G076700.1 Ceric.01G076700 not classified & original description: pacid=50591443... 0.07 OrthoFinder output from all 47 species
Dac_g09294 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g00454 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g05823 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017064001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_00802 No alias microtubule-interacting component CC of cellulose... 0.03 OrthoFinder output from all 47 species
Gb_09110 No alias microtubule-interacting component CC of cellulose... 0.02 OrthoFinder output from all 47 species
LOC_Os01g12820.1 LOC_Os01g12820 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g59330.1 LOC_Os04g59330 microtubule-interacting component CC of cellulose... 0.04 OrthoFinder output from all 47 species
MA_7592930g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g00420 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32935 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02766 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g008965 No alias not classified & original description: CDS=1104-2096 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0114.g020916 No alias not classified & original description: CDS=279-1298 0.04 OrthoFinder output from all 47 species
Sam_g08763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08818 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g13675 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc03g120710.2.1 Solyc03g120710 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc04g078750.3.1 Solyc04g078750 microtubule-interacting component CC of cellulose... 0.02 OrthoFinder output from all 47 species
Spa_g11274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15181 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007480_P002 Zm00001e007480 microtubule-interacting component CC of cellulose... 0.02 OrthoFinder output from all 47 species
Zm00001e015379_P001 Zm00001e015379 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e030085_P001 Zm00001e030085 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e040882_P001 Zm00001e040882 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004864 LEA_2 189 288
No external refs found!