Pnu_g08819

Description : ribosome biogenesis factor *(RsgA) & original description: none

Gene families : OG0001189 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001189_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g08819
Cluster	HCCA: Cluster_130

Target	Alias	Description	ECC score	Gene Family Method
Als_g30276	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g33115	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g11218	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g18575	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g30911	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g51839	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g51840	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g70253	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene16163.t1	Aspi01Gene16163	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene16165.t1	Aspi01Gene16165	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene16345.t1	Aspi01Gene16345	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene16346.t1	Aspi01Gene16346	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene27939.t1	EMB2001, Aspi01Gene27939	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene27941.t1	Aspi01Gene27941	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene35538.t1	Aspi01Gene35538	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene35542.t1	Aspi01Gene35542	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene52943.t1	Aspi01Gene52943	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g12325	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g30388	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g41903	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g13105	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g38987	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g21469	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g24430	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g30592	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g02707	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g17949	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g26873	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g31968	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g64561	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g19703	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g15861	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g44397	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g08099	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006820	monoatomic anion transport	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007743	Immunity-related_GTPase-like	38	233

External Links

No external refs found!

Pnu_g08819

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation