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  5. Pnu_g08916

Pnu_g08916


Description : ubiquitin adaptor protein *(TOL) & original description: none


Gene families : OG0000393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000393_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g08916

Target Alias Description ECC score Gene Family Method Actions
Ala_g32447 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06569 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10029 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g58158 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g03699 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08332 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_11104 No alias TOM endomembrane trafficking associated protein 0.02 OrthoFinder output from all 47 species
LOC_Os01g61030.1 LOC_Os01g61030 TOM endomembrane trafficking associated protein 0.04 OrthoFinder output from all 47 species
LOC_Os02g46962.1 LOC_Os02g46962 TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
LOC_Os10g42724.1 LOC_Os10g42724 TOM endomembrane trafficking associated protein 0.02 OrthoFinder output from all 47 species
Msp_g45551 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08645 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15243 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g02281 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05647 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10790 No alias ubiquiTin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015516_P001 Zm00001e015516 TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA Interproscan
MF GO:0043130 ubiquitin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0015858 nucleoside transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1901642 nucleoside transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002014 VHS_dom 3 112
IPR004152 GAT_dom 193 268
No external refs found!