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  5. Pnu_g09177

Pnu_g09177


Description : not classified & original description: none


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g09177
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Adi_g079009 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11697 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g03033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00283 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g47650.1 RD2, LOC_Os02g47650 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g25137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g41128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_720108g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ppi_g59107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007267 No alias not classified & original description: CDS=1-546 0.02 OrthoFinder output from all 47 species
Spa_g14630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e018234_P001 Zm00001e018234 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e035202_P002 Zm00001e035202 Universal stress protein PHOS32 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 7 156
No external refs found!